Plant Diseases and Their Causes: Notes for Exams
Notes on plant diseases for competitive exams: fungal, bacterial, viral and nematode diseases of crops, deficiency diseases, insect vectors and control measures.
By GK24 Editorial Team· Published · 4 min read

A plant disease is any lasting disturbance of a plant's normal working caused by a living agent or by a shortage of a nutrient. The subject is worth marks in every general science paper because the questions are pairings: a disease, a crop and a causal organism. Nearly all of them come from five groups of causes. Fungi are the largest group and account for most crop losses. Bacteria cause the rots, blights and cankers. Viruses cause the mosaics and leaf curls and are carried by insects. Phytoplasmas, once called mycoplasma-like organisms, cause the yellows and the little-leaf group. Nematodes attack roots. Alongside these living agents are the physiological or deficiency diseases, in which nothing infects the plant at all and a missing mineral produces the symptom.
Diseases caused by fungi
Fungal plant pathogens produce spores that travel on wind, water, seed and soil, and they thrive in humid weather, which is why most Indian fungal epidemics follow the monsoon. The single most famous example in the history of science is late blight of potato, caused by Phytophthora infestans; the epidemic of the 1840s destroyed the potato crop of Ireland and caused the famine and emigration that followed. The study of that outbreak made Anton de Bary the founder of plant pathology, because he proved that the fungus was the cause of the disease and not a result of it.
| Disease | Crop | Causal fungus |
|---|---|---|
| Late blight | Potato | Phytophthora infestans |
| Early blight | Potato and tomato | Alternaria solani |
| Rust | Wheat | Puccinia species |
| Loose smut | Wheat | Ustilago species |
| Blast | Rice | Pyricularia oryzae |
| Red rot | Sugarcane | Colletotrichum falcatum |
| Tikka or leaf spot | Groundnut | Cercospora species |
| Downy mildew | Grape | Plasmopara viticola |
| Wilt | Pigeon pea and cotton | Fusarium species |
| Ergot | Bajra and rye | Claviceps purpurea |
Diseases caused by bacteria
Bacteria enter a plant through wounds, insect punctures and natural openings such as stomata, and they spread in splashing rain and on tools. Citrus canker, which raises corky brown spots on leaves and fruit, is caused by a species of Xanthomonas, and so is bacterial blight of rice, one of the most damaging diseases of the crop in India. Bacterial wilt or brown rot of potato is caused by Ralstonia solanacearum, and crown gall, in which the plant grows a tumour at the collar, is caused by Agrobacterium tumefaciens, the same bacterium that biotechnology now uses to carry genes into plant cells. Tundu disease of wheat is unusual because a bacterium and a nematode act together.
Diseases caused by viruses and phytoplasmas
Plant viruses do not move on their own: an insect, a nematode or infected planting material must carry them. Tobacco mosaic disease matters twice over, because the tobacco mosaic virus was the first virus of any kind to be discovered and later the first to be crystallised, so the whole science of virology begins in a plant disease. Leaf curl of cotton, chilli and tomato and yellow vein mosaic of okra are carried by the whitefly; many mosaics of pulses and cucurbits are carried by aphids; bunchy top of banana, which shortens the plant and bunches its leaves at the top, is also viral. Phytoplasmas, which are bacteria without cell walls, are spread by leafhoppers and cause little leaf of brinjal, grassy shoot of sugarcane and spike disease of sandalwood.
Diseases caused by nematodes
Nematodes are microscopic roundworms of the soil. Root-knot nematodes of the genus Meloidogyne make galls on the roots of vegetables, so the plant wilts in the afternoon even in moist soil, and the molya disease of wheat and barley, important in the dry north-west, is caused by a cyst nematode. Because the damage is below ground, nematode disease is usually diagnosed by pulling up a plant and looking at the roots.
Deficiency or physiological diseases
Here no organism is involved. A plant short of a mineral shows a symptom that looks like a disease, and the cure is the missing nutrient, not a spray against a pathogen. These are favourite examination questions because each symptom has a single mineral attached to it.
| Disease | Crop | Deficient nutrient |
|---|---|---|
| Khaira disease | Rice | Zinc |
| Whiptail | Cauliflower | Molybdenum |
| Brown heart or hollow stem | Cauliflower and turnip | Boron |
| Heart rot | Sugar beet | Boron |
| Internal cork | Apple | Boron |
| Dieback | Citrus | Copper |
| Chlorosis of young leaves | Most crops | Iron |
How plant diseases are controlled
Four measures cover almost every answer. Healthy, treated seed and certified planting material keep a pathogen out of the field in the first place. Crop rotation starves a soil-borne fungus or nematode of its host. Resistant varieties bred for the purpose are the cheapest long-term answer, and the dwarf wheats of the Green Revolution were selected for rust resistance as well as for yield. Chemical control uses fungicides and bactericides, of which the oldest is the Bordeaux mixture, a suspension of copper sulphate and lime devised in France against downy mildew of the grapevine and still sprayed in orchards. For virus diseases there is no cure once a plant is infected, so control works on the vector: destroy the whiteflies and aphids, remove infected plants, and plant virus-free material.
Exam Point of View
Expect a one-line pairing question: name the causal organism of a named disease, or name the disease caused by a named organism. The fungal set is asked most often, and within it late blight of potato, red rot of sugarcane, rust and smut of wheat and blast of rice are near certainties. The second favourite group is the deficiency diseases, where khaira of rice for zinc and whiptail of cauliflower for molybdenum appear again and again, usually with boron diseases as distractors. A third type asks for the vector, and the answer is the whitefly for leaf curl and yellow vein mosaic, the aphid for most other mosaics and the leafhopper for little leaf. The common traps are to call a viral disease fungal, since both show spots and curling, and to answer a fungus when the question is about citrus canker or crown gall, which are bacterial. Papers for agriculture posts add the scientific names, so learn at least the genus in each pair.
Important Facts
| Late blight of potato | Phytophthora infestans, a fungus; cause of the Irish famine |
|---|---|
| Founder of plant pathology | Anton de Bary |
| Rust of wheat | Puccinia species |
| Loose smut of wheat | Ustilago species |
| Blast of rice | Pyricularia oryzae |
| Red rot of sugarcane | Colletotrichum falcatum |
| Tikka disease | Groundnut, caused by Cercospora species |
| Ergot | Claviceps purpurea on bajra and rye; its alkaloids are poisonous |
| Citrus canker | Bacterium of the genus Xanthomonas |
| Crown gall | Agrobacterium tumefaciens; used as a gene vector |
| First virus discovered | Tobacco mosaic virus |
| Whitefly-borne diseases | Leaf curl of cotton and chilli, yellow vein mosaic of okra |
| Little leaf of brinjal | Phytoplasma, spread by leafhoppers |
| Khaira disease of rice | Zinc deficiency |
| Whiptail of cauliflower | Molybdenum deficiency |
| Bordeaux mixture | Copper sulphate and lime; a fungicide |
Practice MCQs on this topic
Late blight of potato is caused by which organism?
- A.A virus
- B.Phytophthora infestans
- C.Xanthomonas citri
- D.Meloidogyne incognita
Show answer
The epidemic of the 1840s destroyed the potato crop of Ireland and brought on the famine, and the study of that outbreak by Anton de Bary established plant pathology as a science.
Read the full explanation →Rust of wheat is caused by a fungus of which genus?
- A.Puccinia
- B.Ustilago
- C.Fusarium
- D.Claviceps
Show answer
The rusts of wheat, named black, brown and yellow after the colour of the pustules they raise on the stem and leaves, are caused by species of Puccinia, and resistance to them was one of the traits selected in the dwarf wheats of the Green Revolution.
Read the full explanation →Red rot, one of the most serious diseases of sugarcane, is caused by
- A.Colletotrichum falcatum
- B.Ralstonia solanacearum
- C.a phytoplasma
- D.a nematode
Show answer
The correct answer is A, Colletotrichum falcatum, a fungus that rots the internal tissue of the cane, turning it red with white patches and giving it a sour smell, and which spreads mainly through infected setts used for planting.
Read the full explanation →Citrus canker in plants is caused by
- A.a fungus
- B.a bacterium
- C.a virus
- D.a deficiency of boron
Show answer
Citrus canker is caused by a species of Xanthomonas, which enters through wounds, insect punctures and stomata and raises raised corky brown lesions, often with a yellow halo, on leaves, twigs and fruit; it spreads in splashing rain, on tools and on infected nursery plants.
Read the full explanation →Khaira disease of rice is caused by the deficiency of which nutrient?
- A.Zinc
- B.Boron
- C.Molybdenum
- D.Copper
Show answer
In khaira disease the leaves of young rice plants develop rusty brown spots that spread until the crop looks scorched, tillering is poor and growth is stunted; an application of zinc sulphate to the soil or as a foliar spray corrects it, which confirms that the cause is a deficiency…
Read the full explanation →Whiptail disease of cauliflower is caused by the deficiency of
- A.Zinc
- B.Iron
- C.Molybdenum
- D.Manganese
Show answer
Where this micronutrient is short, the leaf blade of cauliflower fails to expand and the leaf is reduced to a narrow, whip-like strip along the midrib, which gives the disease its name; the curd is small or does not form at all.
Read the full explanation →Which of the following is a viral disease of plants?
- A.Red rot of sugarcane
- B.Bunchy top of banana
- C.Citrus canker
- D.Loose smut of wheat
Show answer
The correct answer is B, bunchy top of banana, a virus disease in which the plant is severely stunted and its leaves become short, narrow and crowded in a bunch at the top; it is carried by an aphid and by infected suckers used for planting, so control depends on…
Read the full explanation →Bordeaux mixture, used in agriculture, is prepared from
- A.copper sulphate and lime
- B.zinc sulphate and urea
- C.sulphur and common salt
- D.ferrous sulphate and gypsum
Show answer
Bordeaux mixture is a suspension made by adding a solution of copper sulphate to one of lime, and it is the oldest fungicide still in regular use; it was devised in the Bordeaux region of France against downy mildew of the grapevine and is sprayed today on fruit trees, potatoes…
Read the full explanation →Little leaf disease of brinjal is caused by a phytoplasma that is transmitted by
- A.Whitefly
- B.Leafhopper
- C.Honey bee
- D.Earthworm
Show answer
Phytoplasmas are bacteria without cell walls that live in the food-conducting tissue of the plant, and they are carried from plant to plant by sap-sucking leafhoppers, also called jassids; in little leaf of brinjal the leaves become very small and numerous, the plant bushes out and no fruit is set.
Read the full explanation →Root-knot disease, in which galls appear on the roots of vegetable crops, is caused by
- A.a nematode
- B.a fungus
- C.a virus
- D.an excess of nitrogen
Show answer
Root-knot is caused by microscopic soil roundworms of the genus Meloidogyne, which enter the young root, settle in it and make the surrounding tissue swell into knots or galls; the plant then cannot draw water properly and wilts in the afternoon heat even when the soil is moist.
Read the full explanation →Frequently Asked Questions
Which plant disease caused the Irish famine?
Late blight of potato, caused by the fungus Phytophthora infestans. The epidemic of the 1840s destroyed the Irish potato crop for several seasons in succession, and because the population depended on that one crop, the result was mass starvation and emigration.
What is the difference between a fungal and a viral plant disease?
A fungal pathogen is a multicellular or filamentous organism that grows on and in the plant, produces visible spores or mould, and can usually be controlled by a fungicide. A virus is only genetic material in a protein coat; it multiplies inside the plant cells, shows symptoms such as mosaic patterns, leaf curl and stunting, cannot be cured by any spray, and is nearly always carried by an insect vector.
Which mineral deficiency causes khaira disease of rice?
Zinc. The leaves develop rusty brown spots that spread until the plant looks scorched, and growth is stunted. The cure is a soil or foliar application of zinc sulphate, which also shows that the trouble was a deficiency and not an infection.
What is Bordeaux mixture and what is it used for?
It is one of the oldest fungicides, made by mixing a solution of copper sulphate with lime. It was devised in the Bordeaux region of France against downy mildew of the grapevine and is still sprayed on fruit trees, potatoes and vegetables against fungal leaf spots and blights.
Which insect transmits the leaf curl and yellow vein mosaic diseases?
The whitefly. It feeds on the sap of cotton, chilli, tomato and okra and carries the viruses that cause leaf curl and yellow vein mosaic from plant to plant, which is why control of these diseases means control of the whitefly population.
Why is the tobacco mosaic virus important in the history of biology?
Because it was the first virus of any kind to be identified, in work on a diseased tobacco crop, and later the first to be obtained in crystalline form. Both discoveries established that infectious agents smaller than bacteria exist, and the science of virology grew out of the study of this plant disease.
Sources
- Biology (Class XI), Chapter: Mineral Nutrition, on deficiency symptoms of nutrients — NCERT
- Handbook of Agriculture, chapters on crop protection and plant pathology — Indian Council of Agricultural Research
- Plant Protection, Quarantine and Storage: crop disease advisories — Ministry of Agriculture and Farmers Welfare, Government of India





